Howard Hughes Medical Institute
GitHub organization maintained by Scientific Computing Software at HHMI's Janelia Research Campus for use by HHMI staff and external collaborators.
- 143 followers
- 19700 Helix Drive, Ashburn, VA 20147
- http://www.janelia.org
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BigStitcher
BigStitcher PublicImgLib2/BDV implementation of Stitching for large datasets
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multiview-reconstruction
multiview-reconstruction PublicSoftware for the reconstruction of multi-view microscopic acquisitions like Selective Plane Illumination Microscopy (SPIM) Data
Repositories
Showing 10 of 366 repositories
- tmog Public
The Janelia Transmogrifier - tmog - supports the collection of meta data associated with files.
- mia-workflows Public
- n5-blosc2 Public
N5 compressions for the Blosc 1.x (blosc1) and Blosc2 (blosc2) chunk formats, over the JavaCPP preset of C-Blosc2
- refkv-javacpp Public
JavaCPP bindings and a pure-Java reader for refkv, with an N5 KeyValueAccess over refkv stores
- n5-refkv-stream Public
N5 block codec for refkv.stream video (H.264, HEVC, VP9, AV1 in Zarr arrays), decoded with FFmpeg
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